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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938169.1_cds_XP_016483157.1_74300
CDS Infomation

[gene=LOC107803877] [db_xref=GeneID:107803877] [protein=transcription factor bHLH122-like] [protein_id=XP_016483157.1] [location=complement(join(50572..50616,50734..50802,51025..51090,51232..51396,51569..51918,52291..52927))] [gbkey=CDS]
Sequence

ATGGATCACAGAAGTCATCAGCAGCAACAGATGACTTCTGGCTTAACTCGATATCGATCC
GCGCCAAGTTCTTATTTTTCCAGCCTATTAAGTAGTAATAATCCTGCTGCTGTTGCTAGT
GGAGGTGGTAATTGTGGTTATGCAAGAGATGATTTTGAACAGTTGCTCAATTCTCGAGCT
TCGAATACTGATATAAAGCAAGTTTTCGATAGATTTGTGGCTAATATTGATCCACAAGAT
TCGAATTCGAATGGCCTAATTGGTGATACTCAGCAAAATCACATGAGTAATATGAATGTT
AGATCAGAAGTTGTAGCTCCTATGAAACAAGAACACGAAGCTCAGCGGCAGAGTCATAAT
TCGCAGTTTATTGCAGCAGTGAAACAAGAAACTCAGCAAAATAGTGATTATTCTTTGGTT
TCACAGATGAATTATCAAACTCAAGCTCAACAAAATGACAATTCGGACCTTAATTCAGCC
ATGGATAATTTTGCCAGATTTTTGGGTGCGGCAGATTCAAATCGTTTGAACCAGACGAAA
ATGGATGGTGGATTTGGCACTGGTAGTAGTAATTCAAATCTTACTCGTTATAACAGTTCG
CCTGCTGGATTCTTTGCGCAATTTGATATTGAAAATGAATATGGTGCAATGAGAGGCATA
GGGGGTTATGGAGCTGGTGGTAATGCTGCTGCCGAAGCATCATTTCCAACTCCAAACAGG
TTTAGTAGTCAAACGGCTCTCCAATCCGGACAACCGCCTTCTTCGGGGCTATTAGCTCCA
ATCTCCGAATTTGGTGCTAAAAGCATAGAAGAGGGCCGAGCAGGCGATGAAAGTTTTGGT
AAAGGCCATAAAAATGATGACAGTTACATGACAGGTTTCCCCATCCCTTCTTGGGATGAT
TCACAAATGTTGACTGATGATTTCCTTCAAGTACCAGAAGATAATGAGGCCGAGCCGTTC
TCCAATGTAAATGCATCTGATAATCAGAGTAGTGAAGATCGAGCTCGCCCTCCCACTCTA
TTGTCTCATCTGAGTTTGCCTCAAACCTCAGCGGAGTTATCCGCTATGGAGAAACTCTTG
CAAGATTCGGTACCTTGTAAAGTCAGAGCAAAGAGAGGTTGCGCCACTCACCCTCGTAGC
ATCGCCGAGAGGGTAAGAAGAACTCGAATAAGCGAAAGGATGAGGAAGCTGCAAGAGCTT
GTTCCTAACATGGACAAGCAAACAAACACAGCAGATATGTTGGACTTTGCGGCTGACTAC
ATTAAAGAACTAGAGACACAAGTCAAGGCACTATCCGAAAGGCGTTCGAAGTGTACATGC
TCGAATAAATAG

Peptide Sequence

PEP ID

XP_016483157.1
PEP Infomation

PREDICTED: transcription factor bHLH122-like [Nicotiana tabacum]
Sequence

MDHRSHQQQQMTSGLTRYRSAPSSYFSSLLSSNNPAAVASGGGNCGYARDDFEQLLNSRA
SNTDIKQVFDRFVANIDPQDSNSNGLIGDTQQNHMSNMNVRSEVVAPMKQEHEAQRQSHN
SQFIAAVKQETQQNSDYSLVSQMNYQTQAQQNDNSDLNSAMDNFARFLGAADSNRLNQTK
MDGGFGTGSSNSNLTRYNSSPAGFFAQFDIENEYGAMRGIGGYGAGGNAAAEASFPTPNR
FSSQTALQSGQPPSSGLLAPISEFGAKSIEEGRAGDESFGKGHKNDDSYMTGFPIPSWDD
SQMLTDDFLQVPEDNEAEPFSNVNASDNQSSEDRARPPTLLSHLSLPQTSAELSAMEKLL
QDSVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDFAADY
IKELETQVKALSERRSKCTCSNK

Transcript Sequence

Gene sequence data has not been registered.